zlotap/botanik-compendium
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forest working

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Jeff 2024-06-21 09:59:02 +02:00
parent dac8ecad51
commit e8de409b13
4 changed files with 58 additions and 15 deletions
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compendium.pdf
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compendium.tex
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@ -2,6 +2,9 @@
\input{jjpackages.tex} \input{jjpackages.tex}
%\usepackage{tikz}
%\usetikzlibrary{graphs, graphdrawing}
%\usegdlibrary{phylogenetics}
\usepackage{forest} \usepackage{forest}
\tikzset{ \tikzset{
@ -15,7 +18,8 @@
bar/.style={tikz+={\draw[color=#1,line width=2pt] let \p1 = (!u.parent anchor), \p2 = (.child anchor) in ($(\x1, \y2 - 0.5em)!0.5!(\x2, \y2)$) -- ($(\x1, \y2 + 0.5em)!0.5!(\x2, \y2)$);}}, bar/.style={tikz+={\draw[color=#1,line width=2pt] let \p1 = (!u.parent anchor), \p2 = (.child anchor) in ($(\x1, \y2 - 0.5em)!0.5!(\x2, \y2)$) -- ($(\x1, \y2 + 0.5em)!0.5!(\x2, \y2)$);}},
bar/.default=black, bar/.default=black,
} }
\definecolor{treeedgeclr}{RGB}{80, 80, 80} \definecolor{treecolor-edge}{RGB}{120, 120, 120}
\definecolor{treecolor-event}{RGB}{0, 0, 0}
\usepackage{pdfpages} \usepackage{pdfpages}
@ -40,11 +44,23 @@
\section[Systematik der Pflanzen]{Spezieller Teil: Systematik der Pflanzen} \section[Systematik der Pflanzen]{Spezieller Teil: Systematik der Pflanzen}
\subsection{Prokaryota, Eukaryota \& Archea} \subsection{Prokaryota, Eukaryota \& Archea}
\begin{figure}[!ht] \begin{figure}[th!]
\centering \centering
\input{trees/basetree.tex} \input{trees/basetree.tex}
\caption{Stammbaum der drei grundlegenden Reiche des Lebens}
\label{fig:basetree}
\end{figure} \end{figure}
\subsection{Algen}
\begin{figure}[th]
\centering
\input{trees/algae.tex}
\caption{}
\label{fig:algaetree}
\end{figure}

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trees/algae.tex Normal file
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@ -0,0 +1,33 @@
% phyloforest-template.tex
% Template for a phylogenetic tree using forest
\begin{forest}
% <tree layout>
where n children=0{tier=word}{},
for tree = {
s sep=-0.1em,
grow = 0, % 0 deg = right
reversed,
align=left,
parent anchor=east,
child anchor=west,
anchor=west,
edge path={
\noexpand\path[draw, treecolor-edge, line width=1.2pt, \forestoption{edge}]
(!u.parent anchor) |- (.child anchor)\forestoption{edge label};
},
before typesetting nodes={
if content={}{shape=coordinate}{}
},
} % </tree layout>
[[[, label=Bacteria, dot=black
[Cyanobacteria]
[some other]
]]
[[, label=Eucaryota, dot=black
[, label=Primäre Endocytose, bar=treecolor-event[
[Chlorophyta]
[Rhodophyta]
]]
]]]
\end{forest}

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trees/basetree.tex
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@ -12,24 +12,18 @@
child anchor=west, child anchor=west,
anchor=west, anchor=west,
edge path={ edge path={
\noexpand\path[draw, treeedgeclr, line width=1.2pt, \forestoption{edge}] \noexpand\path[draw, treecolor-edge, line width=1.2pt, \forestoption{edge}]
(!u.parent anchor) |- (.child anchor)\forestoption{edge label}; (!u.parent anchor) |- (.child anchor)\forestoption{edge label};
}, },
before typesetting nodes={ before typesetting nodes={
if content={}{shape=coordinate}{} if content={}{shape=coordinate}{}
}, },
} % </tree layout> } % </tree layout>
[, label=Animalia, dot [[
[Ctenophora] [Bacteria]
[, label=NOTE, bar=red [
[\color{green}{Porifera}] [Archea]
[, label=\color{green}{Parahoxozoa}, dot=red [,label=Eucaryogenesis, bar=treecolor-event [Eucaryota]]
[Placozoa]
[, label=Planulozoa, dot=red
[Bilateria]
[Cnidaria]
]
]
] ]
] ]]
\end{forest} \end{forest}